colvarmodule::rotation Member List

This is the complete list of members for colvarmodule::rotation, including all inherited members.

b_debug_gradients	colvarmodule::rotation
build_correlation_matrix(std::vector< cvm::atom_pos > const &pos1, std::vector< cvm::atom_pos > const &pos2)	colvarmodule::rotation	protected
build_correlation_matrix(std::vector< cvm::atom > const &pos1, std::vector< cvm::atom_pos > const &pos2) (defined in colvarmodule::rotation)	colvarmodule::rotation	protected
C	colvarmodule::rotation	private
calc_optimal_rotation(std::vector< atom_pos > const &pos1, std::vector< atom_pos > const &pos2)	colvarmodule::rotation
calc_optimal_rotation(std::vector< cvm::atom > const &pos1, std::vector< atom_pos > const &pos2) (defined in colvarmodule::rotation)	colvarmodule::rotation
calc_optimal_rotation_impl()	colvarmodule::rotation	protected
compute_overlap_matrix()	colvarmodule::rotation	protected
cos_theta(cvm::rvector const &axis) const	colvarmodule::rotation	inline
crossing_threshold	colvarmodule::rotation	static
dcos_theta_dq(cvm::rvector const &axis) const	colvarmodule::rotation	inline
debug_gradients	colvarmodule::rotation	friend
dspin_angle_dq(cvm::rvector const &axis) const	colvarmodule::rotation	inline
init()	colvarmodule::rotation
inverse() const	colvarmodule::rotation	inline
jacobi	colvarmodule::rotation	protected
matrix() const	colvarmodule::rotation	inline
monitor_crossings	colvarmodule::rotation	static
q	colvarmodule::rotation
q_old	colvarmodule::rotation	protected
rotate(cvm::rvector const &v) const	colvarmodule::rotation	inline
rotation()	colvarmodule::rotation
rotation(cvm::quaternion const &qi)	colvarmodule::rotation
rotation(cvm::real angle, cvm::rvector const &axis)	colvarmodule::rotation
rotation_derivative (defined in colvarmodule::rotation)	colvarmodule::rotation	friend
S	colvarmodule::rotation	private
S_backup	colvarmodule::rotation	private
S_eigval	colvarmodule::rotation	private
S_eigvec	colvarmodule::rotation	private
spin_angle(cvm::rvector const &axis) const	colvarmodule::rotation	inline
~rotation()	colvarmodule::rotation